Isaacs FJ, Carr PA, Wang HH, Lajoie MJ, Sterling B, Kraal L, Tolonen AC, Gianoulis T, Goodman D, Reppas NB, Emig CJ, Bang D, Hwang SJ, Jewett MC, Jacobson JM, Church GM (2011)
Precise manipulation of chromosomes in vivo enables genome-wide codon replacement
Science 333(6040):348-53.
Tolonen AC, Haas W, Chilaka AC, Aach J, Gygi SP, Church GM (2011)
Proteome-wide systems analysis of a cellulosic biofuel producing microbe
Nature-EMBO Molecular Systems biology 7:461. free article
Tolonen AC, Chilaka AC, Church GM (2009)
Targeted gene inactivation in Clostridium phytofermentans shows that cellulose degradation requires the family 9 hydrolase Cphy3367
Molecular Microbiology 74(6): 1300-13. free article
Frangeul L, Quillardet P, Castets AM, Humbert JF, Matthijs HC, Cortez D, Tolonen A, Zhang CC, Gribaldo S, Kehr JC, Zilliges Y, Ziemert N, Becker S, Talla E, Latifi A, Billault A, Lepelletier A, Dittmann E, Bouchier C, de Marsac NT (2008)
Highly plastic genome of Microcystis aeruginosa PCC7806, a ubiquitous
toxic freshwater cyanobacterium
BMC Genomics 9: 274
Tolonen AC, Liszt GB, Hess WR (2006)
Genetic manipulation of Prochlorococcus MIT9313: GFP expression on an RSF1010 plasmid and Tn5 transposition
Applied and Environmental Microbiology. 72(12): 7607-13. free article
Tolonen AC, Aach J, Lindell D, Johnson ZI, Rector T, Steen R, Church GM, Chisholm SW (2006)
Global gene expression of Prochlorococcus ecotypes in response to changes in nitrogen availability
Nature-EMBO Molecular Systems Biology Oct 2006 doi:10.1038. free article
Tolonen AC (2005)
Prochlorococcus genetic transformation and the genomics of nitrogen metabolism
Ph.D. Thesis MIT, Cambridge MA USA
Lindell D, Sullivan MB, Johnson ZI, Tolonen AC, Rohwer F, and Chisholm SW (2004)
Transfer of photosynthetic genes to and from Prochlorococcus viruses
Proceedings of the National Academy of Sciences (101): 11013-11018.
Rocap G, Larimer FW, Lamerdin J, Malfatti S, Chain P, Ahlgren NA, Arellano A, Coleman M, Hauser L, Hess WR, Johnson ZI, Land M, Lindell D, Post AF, Regala W, Shah M, Shaw SL, Steglich C, Sullivan MB, Ting CS, Tolonen A, Webb EA, Zinser ER, Chisholm SW (2003)
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
Nature 424 (6952): 1042-1047.
Lee SS, Kennedy S, Tolonen AC, Ruvkun G (2003)
DAF-16 target genes that control C. elegans life-span and metabolism
Science 300 (5619): 644-647.
Tolonen AC, Albeanu DF, Corbett JF, Handley H, Henson C, Malik P (2002)
Optimized in situ construction of oligomers on an array surface
Nucleic Acids Research 30 (20) e107 free article